My attempt at an MCP server for dbSNP.
Overview
what is dbSNP MCP Plugin?
The dbSNP MCP Plugin is a tool that allows developers to retrieve genetic variant information from NCBI's dbSNP database directly within their development environment.
how to use dbSNP MCP Plugin?
To use the dbSNP MCP Plugin, install the required dependencies, set up the MCP server, and use the provided functions to retrieve SNP information by rs ID or search for SNPs using various terms.
key features of dbSNP MCP Plugin?
- Retrieve detailed information about SNPs using rs IDs.
- Search for SNPs by gene names, phenotypes, and other terms.
- Access clinical significance information for genetic variants.
use cases of dbSNP MCP Plugin?
- Researchers can quickly access SNP data for genetic studies.
- Developers can integrate SNP retrieval into bioinformatics applications.
- Clinicians can obtain clinical significance data for variants in patient reports.
FAQ from dbSNP MCP Plugin?
- What are the prerequisites for using the dbSNP MCP Plugin?
You need Python 3.7+ and the MCP CLI tool installed.
- How can I increase my request rate limit?
Obtain an NCBI API key and configure it in your setup to increase the limit from 3 to 10 requests per second.
- What should I do if I encounter issues?
Check your internet connection, verify the rs ID format, ensure your API key is valid, and review error messages for specific issues.