Uniprot Mcp

Name: Uniprot Mcp
Author: fzlzjerry

@fzlzjerry

About Uniprot Mcp

UniProt REST API over MCP: search UniProtKB, fetch entries and FASTA, map identifiers between databases, resolve taxonomy, and search UniRef clusters and proteomes.

Config

Add this server to your MCP-compatible client using the configuration below.

{
  "mcpServers": {
    "fzlzjerry-uniprot-mcp": {
      "args": [
        "run",
        "uniprot-mcp"
      ],
      "env": {
        "UNIPROT_MCP_CONTACT": "<YOUR_EMAIL>"
      },
      "command": "uv"
    }
  }
}

Tools

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We auto-extract tools from the README. The maintainer can list them under a ## Tools heading to populate this section.

Overview

What is Uniprot Mcp?

Uniprot Mcp is an MCP server that wraps the UniProt REST API. It enables searching the UniProt knowledgebase, fetching protein entries and FASTA sequences, mapping identifiers between databases, resolving taxonomy, and searching UniRef clusters and proteomes.

How to use

Comments

Basic information

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