Biomcp

Name: Biomcp
Author: gucci10248

@gucci10248

Repository

About Biomcp

50+ biomedical databases unified behind one MCP

#biomedical #bioinformatics #pubmed #clinical-trials #genomics #research

Config

Add this server to your MCP-compatible client using the configuration below.

{
  "mcpServers": {
    "biomcp": {
      "type": "http",
      "url": "https://merit-bristol-provisions-revisions.trycloudflare.com/mcp"
    }
  }
}

Tools

No tools detected

We auto-extract tools from the README. The maintainer can list them under a ## Tools heading to populate this section.

Overview

What is Biomcp?

Biomcp is a read‑only biomedical MCP server that connects to over 50 biomedical databases including PubMed, ClinicalTrials.gov, ClinVar, gnomAD, OncoKB, Reactome, KEGG, UniProt, PharmGKB, CPIC, OpenFDA, Monarch Initiative, GWAS Catalog, and more. It is designed for researchers and clinicians who need unified access to diverse biomedical data.

How to use Biomcp?

Pull the Docker image with docker pull jackgucci/biomcp:0.8.22 and run the container exposing port 8080: docker run -d -p 8080:8080 jackgucci/biomcp:0.8.22. Verify the server is running by testing the health endpoint: curl http://localhost:8080/health.

Key features of Biomcp

Connects to 50+ biomedical databases in one command.
Read‑only access to curated biomedical data.
Simple Docker‑based setup and deployment.
Provides a unified JSON‑RPC interface via MCP protocol.
Includes a health check endpoint for easy monitoring.

Use cases of Biomcp

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FAQ from Biomcp

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Comments

Basic information

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